Compute & visualize allelic distance between bacterial isolates

Access over 79 cgMLST schemes for 49 species | Integrated cgMLST.org and pubMLST database interfaces

Explore genetic diversity between sets of bacterial isolates

Visualize outbreak, environmental and other populations | Interactive Minimum-spanning trees | Metadata annotation

Antimicrobial Resistance Screening | Antibiotics Resistance - Virulence - Stress genes

Interactive Cluster Heatmap | Allelic/Genetic distance - Antimicrobial resistance patterns

Fast & robust allele calling | cgMLST Typing

Hierarchical tree visualization interface | Neighbour-Joining - UPGMA | Custom metadata annotation